2017-08-25 17:46:072025-05-18 13:16:55
description
two-component response regulator, control of ydfJ expression
two-component response regulator, control of [[gene|ydfJ ]]expression
locus
BSU05420
BSU_05420
geneLength
639
642
function
control of ydfJ expression
control of [[gene|ydfJ ]]expression
outlinks
bsu
BSU05420
BSU_05420
The protein
Paralogous protein(s)
[[protein|LiaR]], [[protein|LnrK]], [[protein|YhcZ]], [[protein|YxjL]]
[[this]]
Biological materials
Mutant
MGNA-C148 (ydfI::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2146 NBRP B. subtilis, Japan]
MGNA-C148 (ydfI::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2146 NBRP B. subtilis, Japan]
BKE05420 (Δ[[gene|ydfI]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE05420 BGSC], [Pubmed|28189581], upstream reverse: _UP1_AAGATGGTCATCAACGATTA, downstream forward: _UP4_TAAACTGCATATTTGAAAAT
BKK05420 (Δ[[gene|ydfI]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK05420 BGSC], [Pubmed|28189581], upstream reverse: _UP1_AAGATGGTCATCAACGATTA, downstream forward: _UP4_TAAACTGCATATTTGAAAAT
References
The protein
[SW|Domains]
[SW|Response regulatory domain] (aa 3-118) (according to UniProt)
[SW|HTH luxR-type domain] (aa 142-207) (according to UniProt)
The protein
Structure
[PDB|5HEV] ([[protein|LiaR ]]from Enterococcus faecium, 37% identity) [pubmed|27670715]